Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| very short patch repair endonuclease | C5P43_36125 | Not Available | Positive | 5949356 - 5949443 | 3011.52 |
| eama family transporter | C5P43_36130 | Not Available | Negative | 5949432 - 5949934 | 17006.3 |
| sensor histidine kinase | C5P43_36135 | Not Available | Negative | 5949993 - 5950513 | 19456.8 |
| very short patch repair endonuclease | C5P43_36140 | Not Available | Positive | 5950514 - 5950601 | 3011.52 |
| eama family transporter | C5P43_36145 | Not Available | Negative | 5950590 - 5951092 | 17006.3 |
| yhch/yjgk/yial family protein | C5P43_36150 | Not Available | Negative | 5951093 - 5951475 | 14495.2 |
| abc transporter substrate-binding protein | C5P43_36155 | Not Available | Negative | 5951671 - 5951843 | 6512.68 |
| carboxymuconolactone decarboxylase family protein | C5P43_36160 | Not Available | Negative | 5951853 - 5952248 | 14420.3 |
| yhch/yjgk/yial family protein | C5P43_36165 | Not Available | Negative | 5952249 - 5952631 | 14485.1 |
| hypothetical protein | C5P43_36170 | Not Available | Negative | 5952827 - 5953277 | 16868.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





