Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp nucleosidase | C5P43_35865 | Not Available | Negative | 5925110 - 5925351 | 8934.77 |
| sprt family zinc-dependent metalloprotease | C5P43_35870 | Not Available | Negative | 5925352 - 5925757 | 15825.3 |
| trimethylamine-n-oxide reductase 2 | C5P43_35875 | Not Available | Positive | 5925943 - 5926409 | 16598.7 |
| metal-dependent hydrolase | C5P43_35880 | Not Available | Positive | 5926534 - 5927075 | 20588.5 |
| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase | C5P43_35885 | Not Available | Positive | 5927125 - 5927715 | 22875.2 |
| sprt family zinc-dependent metalloprotease | C5P43_35890 | Not Available | Negative | 5927716 - 5928121 | 15825.3 |
| trimethylamine-n-oxide reductase 2 | C5P43_35895 | Not Available | Positive | 5928307 - 5928773 | 16584.7 |
| metal-dependent hydrolase | C5P43_35900 | Not Available | Positive | 5928898 - 5929439 | 20618.5 |
| alpha/beta hydrolase | C5P43_35905 | Not Available | Positive | 5929489 - 5929614 | 4777.68 |
| inositol phosphorylceramide synthase | C5P43_35910 | Not Available | Positive | 5929628 - 5930078 | 17498.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





