Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_35695 | Not Available | Negative | 5906407 - 5906619 | 8007.14 |
| hypothetical protein | C5P43_35700 | Not Available | Positive | 5906733 - 5906871 | 5368.82 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | C5P43_35705 | Not Available | Positive | 5906872 - 5907471 | 21744.9 |
| hypothetical protein | C5P43_35710 | Not Available | Negative | 5907607 - 5907819 | 7986.2 |
| hypothetical protein | C5P43_35715 | Not Available | Positive | 5907933 - 5908071 | 5368.82 |
| prepilin peptidase | C5P43_35720 | Not Available | Positive | 5908072 - 5908670 | 22295.7 |
| agmatinase | C5P43_35725 | Not Available | Negative | 5908671 - 5909092 | 15767.7 |
| gamma-glutamyltransferase | C5P43_35730 | Not Available | Positive | 5909270 - 5909868 | 21071.0 |
| gamma-glutamyltransferase | C5P43_35735 | Not Available | Positive | 5909869 - 5910467 | 21071.0 |
| bifunctional udp-glucuronic acid oxidase/udp-4-amino-4-deoxy-l-arabinose formyltransferase | C5P43_35740 | Not Available | Positive | 5910468 - 5911065 | 22595.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





