Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-cystine abc transporter atp-binding protein yecc | C5P43_35340 | Not Available | Negative | 5871218 - 5871342 | 4256.26 |
| amino acid abc transporter permease | C5P43_35345 | Not Available | Negative | 5871339 - 5871846 | 18754.9 |
| colanic acid biosynthesis acetyltransferase wcab | C5P43_35350 | Not Available | Positive | 5871847 - 5872065 | 7271.87 |
| colanic acid biosynthesis glycosyltransferase wcac | C5P43_35355 | Not Available | Positive | 5872062 - 5872474 | 15749.1 |
| beta-glucuronidase | C5P43_35360 | Not Available | Negative | 5872475 - 5873102 | 23362.5 |
| hypothetical protein | C5P43_35365 | Not Available | Negative | 5873103 - 5873239 | 4889.71 |
| flagellar filament capping protein flid | C5P43_35375 | Not Available | Positive | 5873505 - 5873728 | 7561.88 |
| cytochrome d ubiquinol oxidase subunit ii | C5P43_35380 | Not Available | Negative | 5873729 - 5874329 | 22372.1 |
| amino acid abc transporter permease | C5P43_35385 | Not Available | Positive | 5874355 - 5874824 | 16977.3 |
| polar amino acid abc transporter permease | C5P43_35390 | Not Available | Positive | 5874824 - 5874980 | 5729.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





