Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | C5P43_01745 | Not Available | Positive | 323616 - 323952 | 11959.1 |
| n-acetylmannosamine kinase | C5P43_01750 | Not Available | Positive | 323953 - 324632 | 22952.6 |
| yhch/yjgk/yial family protein | C5P43_01755 | Not Available | Positive | 324629 - 325093 | 17052.7 |
| duf1016 domain-containing protein | C5P43_01760 | Not Available | Negative | 325153 - 326280 | 43512.1 |
| glutamate synthase | C5P43_01765 | Not Available | Negative | 326464 - 327882 | 52018.3 |
| glutamate synthase large subunit | C5P43_01770 | Not Available | Negative | 327895 - 332355 | 163320.0 |
| hypothetical protein | C5P43_01780 | Not Available | Positive | 332402 - 332638 | 9219.28 |
| tigr01212 family radical sam protein | C5P43_01785 | Not Available | Positive | 333030 - 333959 | 34680.6 |
| hybrid sensor histidine kinase/response regulator | C5P43_01790 | Not Available | Positive | 334055 - 336391 | 87988.0 |
| glutamine amidotransferase | C5P43_01795 | Not Available | Positive | 336621 - 337274 | 22996.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





