Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase family protein | C5P43_35035 | Not Available | Negative | 5839500 - 5840035 | 18956.8 |
| papc/fimd family outer membrane usher protein | C5P43_35040 | Not Available | Negative | 5840036 - 5840681 | 23728.0 |
| lysr family transcriptional regulator | C5P43_35045 | Not Available | Positive | 5840682 - 5840887 | 7687.24 |
| hypothetical protein | C5P43_35050 | Not Available | Positive | 5840964 - 5841327 | 14111.8 |
| pheromone autoinducer 2 transporter | C5P43_35055 | Not Available | Negative | 5841371 - 5841972 | 21509.4 |
| pheromone autoinducer 2 transporter | C5P43_35060 | Not Available | Negative | 5842016 - 5842617 | 21525.5 |
| hypothetical protein | C5P43_35065 | Not Available | Negative | 5842618 - 5842863 | 9168.84 |
| amino acid dehydrogenase | C5P43_35070 | Not Available | Negative | 5842856 - 5843261 | 14769.0 |
| 23s rrna (guanine(745)-n(1))-methyltransferase | C5P43_35075 | Not Available | Negative | 5843262 - 5843905 | 23838.7 |
| lactate utilization protein c | C5P43_35080 | Not Available | Negative | 5843906 - 5844151 | 9195.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





