Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | C5P43_34325 | Not Available | Positive | 5762639 - 5763316 | 24970.7 |
| hydrogenase | C5P43_34330 | Not Available | Positive | 5763317 - 5763994 | 24518.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | C5P43_34335 | Not Available | Positive | 5763995 - 5764672 | 24970.7 |
| hydrogenase | C5P43_34340 | Not Available | Positive | 5764673 - 5765350 | 24530.6 |
| xanthine permease xanp | C5P43_34345 | Not Available | Negative | 5765356 - 5766026 | 23496.3 |
| xanthine permease xanp | C5P43_34350 | Not Available | Negative | 5766032 - 5766702 | 23496.3 |
| dna polymerase iv | C5P43_34355 | Not Available | Negative | 5766703 - 5767377 | 24709.1 |
| phosphoribosylformylglycinamidine synthase | C5P43_34360 | Not Available | Positive | 5767378 - 5768052 | 24385.9 |
| hypothetical protein | C5P43_34365 | Not Available | Negative | 5768053 - 5768530 | 18061.8 |
| hypothetical protein | C5P43_34370 | Not Available | Positive | 5768510 - 5768727 | 8356.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





