Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stress protection protein marc | C5P43_34225 | Not Available | Negative | 5752964 - 5753097 | 4677.12 |
| agmatinase | C5P43_34230 | Not Available | Positive | 5753098 - 5753723 | 22435.9 |
| agmatinase | C5P43_34235 | Not Available | Positive | 5753785 - 5754410 | 22420.9 |
| acetyl-coa c-acyltransferase fadi | C5P43_34240 | Not Available | Positive | 5754472 - 5755155 | 24628.3 |
| atp-binding protein | C5P43_34245 | Not Available | Positive | 5755341 - 5755837 | 18297.6 |
| imidazole glycerol phosphate synthase subunit hisf | C5P43_34250 | Not Available | Negative | 5755838 - 5756154 | 11475.8 |
| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase | C5P43_34255 | Not Available | Negative | 5756136 - 5756519 | 13437.9 |
| dimethyl sulfoxide reductase subunit a | C5P43_34260 | Not Available | Negative | 5756520 - 5757200 | 26150.2 |
| dimethyl sulfoxide reductase subunit a | C5P43_34265 | Not Available | Negative | 5757201 - 5757881 | 26177.2 |
| glycine cleavage system protein h | C5P43_34270 | Not Available | Negative | 5757882 - 5758107 | 8014.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





