Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abrb/maze/spovt family dna-binding domain-containing protein | C5P43_33865 | Not Available | Positive | 5712607 - 5712759 | 5743.71 |
| trna(fmet)-specific endonuclease vapc | C5P43_33870 | Not Available | Positive | 5712759 - 5713157 | 14895.2 |
| type iv secretion protein rhs | C5P43_33875 | Not Available | Negative | 5713318 - 5713486 | 6036.79 |
| pili assembly chaperone | C5P43_33885 | Not Available | Positive | 5714029 - 5714415 | 14253.0 |
| dihydroorotate dehydrogenase | C5P43_33890 | Not Available | Positive | 5714526 - 5714737 | 7971.76 |
| dethiobiotin synthase | C5P43_33895 | Not Available | Negative | 5714738 - 5715384 | 23154.6 |
| hypothetical protein | C5P43_33900 | Not Available | Negative | 5715446 - 5716153 | 25134.5 |
| glucan biosynthesis protein | C5P43_33905 | Not Available | Positive | 5716171 - 5716785 | 23165.1 |
| hypothetical protein | C5P43_33910 | Not Available | Negative | 5716862 - 5717569 | 25134.5 |
| glucan biosynthesis protein | C5P43_33915 | Not Available | Positive | 5717587 - 5718201 | 23165.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





