Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_33205 | Not Available | Positive | 5635605 - 5635866 | 9997.86 |
| two-component system response regulator qsef/glrr | C5P43_33210 | Not Available | Negative | 5635867 - 5636590 | 25974.2 |
| pitrilysin | C5P43_33215 | Not Available | Negative | 5636626 - 5637384 | 27671.9 |
| trna dihydrouridine(16) synthase dusc | C5P43_33220 | Not Available | Positive | 5637385 - 5638143 | 27728.5 |
| outer membrane assembly protein asma | C5P43_33225 | Not Available | Positive | 5638144 - 5638902 | 27769.7 |
| sdr family oxidoreductase | C5P43_33230 | Not Available | Positive | 5638903 - 5639203 | 10396.5 |
| deda family protein | C5P43_33235 | Not Available | Negative | 5639333 - 5639661 | 12423.7 |
| pitrilysin | C5P43_33240 | Not Available | Negative | 5639662 - 5640420 | 27671.9 |
| trna dihydrouridine(16) synthase dusc | C5P43_33245 | Not Available | Positive | 5640421 - 5641179 | 27710.5 |
| two-component system response regulator qsef/glrr | C5P43_33250 | Not Available | Negative | 5641180 - 5641903 | 25974.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





