Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis protein thif | C5P43_32900 | Not Available | Positive | 5605756 - 5605839 | 3171.14 |
| adenine deaminase | C5P43_32905 | Not Available | Negative | 5605885 - 5606540 | 23182.6 |
| two-component system sensor histidine kinase kdbd | C5P43_32910 | Not Available | Negative | 5606541 - 5607323 | 28519.3 |
| acyl-coa synthetase fdra | C5P43_32915 | Not Available | Positive | 5607324 - 5608104 | 27266.9 |
| atp-binding protein | C5P43_32920 | Not Available | Positive | 5608105 - 5608427 | 11811.1 |
| hypothetical protein | C5P43_32925 | Not Available | Negative | 5608476 - 5608885 | 14335.2 |
| acyl-coa synthetase fdra | C5P43_32930 | Not Available | Positive | 5608886 - 5609666 | 27209.9 |
| atp-binding protein | C5P43_32935 | Not Available | Positive | 5609667 - 5609989 | 11855.2 |
| hypothetical protein | C5P43_32940 | Not Available | Negative | 5610038 - 5610447 | 14335.2 |
| type iv secretion protein rhs | C5P43_32945 | Not Available | Positive | 5610448 - 5611227 | 29522.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





