Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopentomutase | C5P43_32800 | Not Available | Negative | 5594675 - 5595455 | 28098.2 |
| l-lactate dehydrogenase | C5P43_32805 | Not Available | Positive | 5595473 - 5595688 | 7283.05 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | C5P43_32810 | Not Available | Positive | 5595874 - 5596269 | 14993.0 |
| dna topoisomerase iii | C5P43_32815 | Not Available | Positive | 5596270 - 5597064 | 29695.8 |
| dna topoisomerase iii | C5P43_32820 | Not Available | Positive | 5597065 - 5597859 | 29665.8 |
| recombination factor protein rara | C5P43_32825 | Not Available | Positive | 5597860 - 5598651 | 28838.2 |
| bifunctional glycosyl transferase/transpeptidase | C5P43_32830 | Not Available | Positive | 5598652 - 5599443 | 30081.3 |
| bifunctional glycosyl transferase/transpeptidase | C5P43_32835 | Not Available | Positive | 5599444 - 5600235 | 30081.3 |
| recombination factor protein rara | C5P43_32840 | Not Available | Positive | 5600236 - 5601027 | 28837.2 |
| gamma-glutamyltransferase | C5P43_32845 | Not Available | Negative | 5601028 - 5601324 | 9879.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





