Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| primosomal protein n' | C5P43_32695 | Not Available | Positive | 5580873 - 5581694 | 30593.0 |
| primosomal protein n' | C5P43_32700 | Not Available | Positive | 5581695 - 5582516 | 30633.0 |
| two-component system response regulator qsef/glrr | C5P43_32705 | Not Available | Positive | 5582517 - 5583254 | 27603.3 |
| trimethylamine-n-oxide reductase 2 | C5P43_32710 | Not Available | Negative | 5583338 - 5584153 | 31194.1 |
| flagellar filament capping protein flid | C5P43_32715 | Not Available | Negative | 5584154 - 5584969 | 27939.8 |
| flagellar filament capping protein flid | C5P43_32720 | Not Available | Negative | 5584970 - 5585785 | 27953.9 |
| aldo/keto reductase | C5P43_32725 | Not Available | Negative | 5585786 - 5586600 | 30478.1 |
| aspartate--ammonia ligase | C5P43_32735 | Not Available | Positive | 5587415 - 5588227 | 29999.6 |
| acetyl-coa c-acyltransferase | C5P43_32740 | Not Available | Negative | 5588286 - 5589034 | 25987.6 |
| sulfite reductase subunit alpha | C5P43_32745 | Not Available | Positive | 5589035 - 5589841 | 30159.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





