Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna adenine methylase | C5P43_01490 | Not Available | Positive | 279044 - 279880 | 32101.2 |
| ribulose-phosphate 3-epimerase | C5P43_01495 | Not Available | Positive | 279898 - 280575 | 24555.7 |
| phosphoglycolate phosphatase | C5P43_01500 | Not Available | Positive | 280568 - 281326 | 27362.7 |
| tryptophan--trna ligase | C5P43_01505 | Not Available | Positive | 281319 - 282323 | 37468.0 |
| hypothetical protein | C5P43_01510 | Not Available | Positive | 282592 - 283497 | 33479.4 |
| prd domain-containing protein | C5P43_01515 | Not Available | Positive | 283514 - 283876 | 13528.5 |
| yhfx family plp-dependent enzyme | C5P43_01520 | Not Available | Positive | 283960 - 285123 | 42349.8 |
| phosphopentomutase | C5P43_01525 | Not Available | Positive | 285123 - 286349 | 44597.3 |
| phosphotriesterase-related protein | C5P43_01530 | Not Available | Positive | 286346 - 287224 | 32855.3 |
| duf2620 domain-containing protein | C5P43_01535 | Not Available | Positive | 287235 - 287588 | 12463.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





