Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adhesin | C5P43_31980 | Not Available | Negative | 5489539 - 5490104 | 20196.1 |
| hypothetical protein | C5P43_31985 | Not Available | Negative | 5490118 - 5490467 | 12796.2 |
| dna (cytosine-5-)-methyltransferase | C5P43_31990 | Not Available | Positive | 5490468 - 5490905 | 16633.9 |
| very short patch repair endonuclease | C5P43_31995 | Not Available | Positive | 5490886 - 5491356 | 18002.6 |
| phosphoribosylformylglycinamidine synthase | C5P43_32000 | Not Available | Negative | 5491396 - 5492318 | 33057.9 |
| is5/is1182 family transposase | C5P43_32005 | Not Available | Negative | 5492319 - 5493205 | 33749.2 |
| dimethyl sulfoxide reductase | C5P43_32010 | Not Available | Negative | 5493240 - 5493445 | 7465.5 |
| dimethyl sulfoxide reductase subunit b | C5P43_32015 | Not Available | Negative | 5493447 - 5494064 | 22870.1 |
| dimethyl sulfoxide reductase subunit a | C5P43_32020 | Not Available | Negative | 5494075 - 5494158 | 2928.51 |
| p-hydroxybenzoic acid efflux pump subunit aaea | C5P43_32025 | Not Available | Negative | 5494159 - 5495056 | 33393.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





