Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar regulatory protein fliz | C5P43_31780 | Not Available | Positive | 5463853 - 5463944 | 3736.68 |
| spermidine/putrescine abc transporter substrate-binding protein potf | C5P43_31785 | Not Available | Negative | 5463945 - 5464907 | 35194.8 |
| spermidine/putrescine abc transporter substrate-binding protein potf | C5P43_31790 | Not Available | Negative | 5464908 - 5465870 | 35220.9 |
| acetyl-coa c-acyltransferase | C5P43_31795 | Not Available | Positive | 5465871 - 5466734 | 30445.9 |
| phenylacetate-coa ligase | C5P43_31800 | Not Available | Positive | 5466761 - 5466831 | 2532.0 |
| duf3304 domain-containing protein | C5P43_31805 | Not Available | Positive | 5466900 - 5467454 | 20601.8 |
| zinc/cadmium/mercury/lead-transporting atpase | C5P43_31810 | Not Available | Positive | 5467881 - 5468751 | 31131.6 |
| polysaccharide export protein wza | C5P43_31815 | Not Available | Positive | 5468752 - 5469711 | 35247.2 |
| zinc/cadmium/mercury/lead-transporting atpase | C5P43_31820 | Not Available | Positive | 5469801 - 5470671 | 31127.6 |
| polysaccharide export protein wza | C5P43_31825 | Not Available | Positive | 5470672 - 5471631 | 35247.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





