Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system protein h | C5P43_31180 | Not Available | Negative | 5386299 - 5386589 | 10038.5 |
| hypothetical protein | C5P43_31185 | Not Available | Negative | 5386590 - 5387399 | 31479.2 |
| phosphoribosylamine--glycine ligase | C5P43_31190 | Not Available | Positive | 5387657 - 5388455 | 28916.2 |
| two-component system response regulator | C5P43_31195 | Not Available | Negative | 5388452 - 5388723 | 9731.79 |
| hypothetical protein | C5P43_31200 | Not Available | Negative | 5388724 - 5389533 | 31680.4 |
| hypothetical protein | C5P43_31205 | Not Available | Negative | 5389530 - 5389742 | 7771.25 |
| mfs transporter | C5P43_31210 | Not Available | Negative | 5389791 - 5390817 | 37098.6 |
| 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase | C5P43_31215 | Not Available | Positive | 5390875 - 5391663 | 28088.8 |
| 4-hydroxyphenylacetate permease | C5P43_31220 | Not Available | Positive | 5391778 - 5391921 | 5091.15 |
| kdo(2)-lipid a phosphoethanolamine 7''-transferase | C5P43_31225 | Not Available | Positive | 5392161 - 5392984 | 30916.0 |
Pathways
900 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





