Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aida-i family autotransporter yfal | C5P43_31080 | Not Available | Positive | 5369156 - 5370268 | 37833.8 |
| aida-i family autotransporter yfal | C5P43_31085 | Not Available | Positive | 5370269 - 5371381 | 37884.7 |
| enoyl-[acyl-carrier-protein] reductase fabi | C5P43_31090 | Not Available | Negative | 5371591 - 5372379 | 27865.5 |
| endonuclease/exonuclease/phosphatase family protein | C5P43_31095 | Not Available | Positive | 5372491 - 5373125 | 23610.6 |
| sam-dependent methyltransferase | C5P43_31100 | Not Available | Positive | 5373203 - 5373592 | 14089.3 |
| anion permease | C5P43_31105 | Not Available | Positive | 5373593 - 5374353 | 27598.6 |
| ribonuclease i | C5P43_31110 | Not Available | Positive | 5374467 - 5374692 | 8629.1 |
| anion permease | C5P43_31115 | Not Available | Positive | 5374693 - 5375453 | 27598.6 |
| ribonuclease i | C5P43_31120 | Not Available | Positive | 5375567 - 5375792 | 8629.1 |
| porin ompc | C5P43_31125 | Not Available | Negative | 5375793 - 5376890 | 40098.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





