Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid iii flippase wzxe | C5P43_31030 | Not Available | Negative | 5362699 - 5363562 | 31730.8 |
| l-rhamnose mutarotase | C5P43_31035 | Not Available | Negative | 5363563 - 5363747 | 7191.56 |
| rhamnulose-1-phosphate aldolase | C5P43_31040 | Not Available | Negative | 5363757 - 5364581 | 30057.1 |
| heat-inducible protein | C5P43_31045 | Not Available | Positive | 5364684 - 5364966 | 10118.3 |
| duf333 domain-containing protein | C5P43_31050 | Not Available | Negative | 5364963 - 5365229 | 8696.44 |
| pyruvate-flavodoxin oxidoreductase | C5P43_31055 | Not Available | Positive | 5365503 - 5365801 | 10341.4 |
| cell envelope integrity protein cred | C5P43_31060 | Not Available | Positive | 5365825 - 5366919 | 40418.7 |
| cell envelope integrity protein cred | C5P43_31065 | Not Available | Positive | 5366943 - 5368037 | 40455.9 |
| phosphonate c-p lyase system protein phnk | C5P43_31070 | Not Available | Positive | 5368038 - 5368456 | 15335.7 |
| phosphonate c-p lyase system protein phnl | C5P43_31075 | Not Available | Positive | 5368633 - 5369155 | 19294.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





