Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | C5P43_30980 | Not Available | Negative | 5355659 - 5356208 | 20701.9 |
| chemotaxis protein chew | C5P43_30985 | Not Available | Negative | 5356353 - 5356795 | 15862.2 |
| biotin synthase | C5P43_30990 | Not Available | Positive | 5356953 - 5357929 | 36254.6 |
| undecaprenyl-phosphate glucose phosphotransferase | C5P43_30995 | Not Available | Positive | 5357930 - 5358379 | 17347.1 |
| colanic acid exporter | C5P43_31000 | Not Available | Positive | 5358381 - 5359057 | 24587.7 |
| prepilin peptidase | C5P43_31005 | Not Available | Negative | 5359058 - 5359253 | 7347.23 |
| accessory colonization factor acfd | C5P43_31010 | Not Available | Negative | 5359393 - 5360185 | 29271.1 |
| duf2138 domain-containing protein | C5P43_31015 | Not Available | Negative | 5360186 - 5361311 | 41478.3 |
| duf2138 domain-containing protein | C5P43_31020 | Not Available | Negative | 5361312 - 5362437 | 41483.3 |
| 4-alpha-l-fucosyltransferase | C5P43_31025 | Not Available | Negative | 5362438 - 5362702 | 9783.72 |
Pathways
916 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





