Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil/xanthine transporter | C5P43_30930 | Not Available | Positive | 5349956 - 5351101 | 41178.6 |
| flagellar type iii secretion system protein flip | C5P43_30935 | Not Available | Positive | 5351102 - 5351371 | 9685.47 |
| flagellar biosynthetic protein fliq | C5P43_30940 | Not Available | Positive | 5351381 - 5351650 | 9632.54 |
| flagellar type iii secretion system protein flir | C5P43_30945 | Not Available | Positive | 5351659 - 5352245 | 21474.2 |
| molecular chaperone hscc | C5P43_30950 | Not Available | Negative | 5352246 - 5353231 | 36400.4 |
| ribonucleoside hydrolase 1 domain protein | C5P43_30955 | Not Available | Negative | 5353315 - 5353383 | 2571.13 |
| cystine abc transporter substrate-binding protein | C5P43_30960 | Not Available | Positive | 5353525 - 5354325 | 28996.8 |
| d-cysteine desulfhydrase | C5P43_30965 | Not Available | Positive | 5354430 - 5354521 | 3705.54 |
| methyl-accepting chemotaxis protein | C5P43_30970 | Not Available | Negative | 5354522 - 5355071 | 20728.0 |
| chemotaxis protein chew | C5P43_30975 | Not Available | Negative | 5355216 - 5355658 | 15862.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





