Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_30880 | Not Available | Positive | 5343029 - 5343373 | 13010.7 |
| hypothetical protein | C5P43_30885 | Not Available | Positive | 5343388 - 5344098 | 26534.4 |
| phosphate abc transporter substrate-binding protein | C5P43_30890 | Not Available | Positive | 5344187 - 5344531 | 13038.6 |
| hypothetical protein | C5P43_30895 | Not Available | Positive | 5344546 - 5345256 | 26635.5 |
| arabinose-5-phosphate isomerase gutq | C5P43_30900 | Not Available | Positive | 5345345 - 5345627 | 9758.77 |
| nitric oxide reductase transcriptional regulator norr | C5P43_30905 | Not Available | Negative | 5345624 - 5346501 | 32160.7 |
| arabinose-5-phosphate isomerase gutq | C5P43_30910 | Not Available | Positive | 5346502 - 5346784 | 9772.8 |
| nitric oxide reductase transcriptional regulator norr | C5P43_30915 | Not Available | Negative | 5346781 - 5347658 | 32253.8 |
| glutamate decarboxylase | C5P43_30920 | Not Available | Negative | 5347659 - 5348809 | 43046.6 |
| uracil/xanthine transporter | C5P43_30925 | Not Available | Positive | 5348810 - 5349955 | 41210.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





