Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase-peroxidase | C5P43_30780 | Not Available | Negative | 5329020 - 5330198 | 43388.5 |
| duf1471 domain-containing protein | C5P43_30785 | Not Available | Positive | 5330415 - 5330651 | 8442.19 |
| protein rclc | C5P43_30790 | Not Available | Positive | 5330663 - 5331256 | 21900.7 |
| l,d-transpeptidase | C5P43_30795 | Not Available | Positive | 5331448 - 5332380 | 34397.1 |
| Trna-asn | Not Available | Not Available | Positive | 5332436 - 5332511 | Not Available |
| l,d-transpeptidase | C5P43_30805 | Not Available | Positive | 5332619 - 5333551 | 34376.0 |
| Trna-asn | Not Available | Not Available | Positive | 5333607 - 5333682 | Not Available |
| 2-methylcitrate synthase | C5P43_30815 | Not Available | Negative | 5333713 - 5334301 | 21392.6 |
| methylisocitrate lyase | C5P43_30820 | Not Available | Negative | 5334346 - 5334881 | 19926.7 |
| 2-methylcitrate synthase | C5P43_30825 | Not Available | Negative | 5334882 - 5335470 | 21392.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





