Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2627 domain-containing protein | C5P43_30680 | Not Available | Positive | 5318764 - 5318907 | 5212.44 |
| cold-shock protein cspc | C5P43_30685 | Not Available | Positive | 5318920 - 5319129 | 7402.76 |
| 23s rrna (guanine(745)-n(1))-methyltransferase | C5P43_30690 | Not Available | Positive | 5319295 - 5319545 | 9657.57 |
| isochorismatase | C5P43_30695 | Not Available | Positive | 5319546 - 5320054 | 19069.2 |
| 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | C5P43_30700 | Not Available | Positive | 5320054 - 5320731 | 24127.8 |
| flagellar motor switch protein flin | C5P43_30705 | Not Available | Positive | 5320732 - 5320955 | 8051.99 |
| flagellar type iii secretion system protein flio | C5P43_30710 | Not Available | Positive | 5320958 - 5321323 | 12698.7 |
| flagellar biosynthetic protein flip | C5P43_30715 | Not Available | Positive | 5321323 - 5321917 | 21876.5 |
| isochorismatase | C5P43_30720 | Not Available | Positive | 5321918 - 5322426 | 19069.2 |
| 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | C5P43_30725 | Not Available | Positive | 5322426 - 5323103 | 24141.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





