Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit b | C5P43_30530 | Not Available | Positive | 5297789 - 5298696 | 34746.4 |
| dna gyrase subunit b | C5P43_30535 | Not Available | Positive | 5299017 - 5299924 | 34746.4 |
| abc transporter permease | C5P43_30540 | Not Available | Negative | 5300245 - 5300776 | 19590.9 |
| abc transporter atp-binding protein | C5P43_30545 | Not Available | Negative | 5300773 - 5301459 | 24564.5 |
| abc transporter permease | C5P43_30550 | Not Available | Negative | 5301471 - 5302002 | 19590.9 |
| abc transporter atp-binding protein | C5P43_30555 | Not Available | Negative | 5301999 - 5302685 | 24534.5 |
| autotransporter outer membrane beta-barrel domain-containing protein | C5P43_30560 | Not Available | Negative | 5302697 - 5303916 | 42581.6 |
| autotransporter outer membrane beta-barrel domain-containing protein | C5P43_30565 | Not Available | Negative | 5303917 - 5305136 | 42628.6 |
| hth-type transcriptional regulator ular | C5P43_30570 | Not Available | Positive | 5305137 - 5305594 | 16402.0 |
| esterase | C5P43_30575 | Not Available | Negative | 5305591 - 5306340 | 27620.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





