Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_30480 | Not Available | Negative | 5292197 - 5292559 | 13769.1 |
| hypothetical protein | C5P43_30485 | Not Available | Negative | 5292549 - 5292868 | 11696.8 |
| 2-deoxy-d-gluconate 3-dehydrogenase | C5P43_30490 | Not Available | Positive | 5292869 - 5293610 | 26292.7 |
| arabinose:proton symporter | C5P43_30495 | Not Available | Positive | 5293925 - 5294099 | 6179.65 |
| 2-deoxy-d-gluconate 3-dehydrogenase | C5P43_30500 | Not Available | Positive | 5294100 - 5294841 | 26307.7 |
| arabinose:proton symporter | C5P43_30505 | Not Available | Positive | 5295156 - 5295330 | 6179.65 |
| nitrogen assimilation transcriptional regulator | C5P43_30510 | Not Available | Positive | 5295331 - 5296238 | 32276.3 |
| transcriptional regulator cbl | C5P43_30515 | Not Available | Positive | 5296340 - 5296559 | 8415.35 |
| nitrogen assimilation transcriptional regulator | C5P43_30520 | Not Available | Positive | 5296560 - 5297467 | 32288.4 |
| transcriptional regulator cbl | C5P43_30525 | Not Available | Positive | 5297569 - 5297788 | 8415.35 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





