Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnulokinase | C5P43_30425 | Not Available | Positive | 5287311 - 5287932 | 23698.2 |
| yebc/pmpr family dna-binding transcriptional regulator | C5P43_30430 | Not Available | Positive | 5287933 - 5288353 | 15188.7 |
| Trna-asn | Not Available | Not Available | Positive | 5288804 - 5288879 | Not Available |
| hypothetical protein | C5P43_30445 | Not Available | Negative | 5288980 - 5289167 | 7132.92 |
| arac family transcriptional regulator | C5P43_30450 | Not Available | Negative | 5289168 - 5289493 | 12261.4 |
| rhamnulokinase | C5P43_30455 | Not Available | Positive | 5289781 - 5290402 | 23679.2 |
| radical sam protein | C5P43_30460 | Not Available | Negative | 5290470 - 5290967 | 19233.0 |
| hypothetical protein | C5P43_30465 | Not Available | Negative | 5290964 - 5291326 | 13783.2 |
| hypothetical protein | C5P43_30470 | Not Available | Negative | 5291316 - 5291635 | 11696.8 |
| radical sam protein | C5P43_30475 | Not Available | Negative | 5291703 - 5292200 | 19242.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





