Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | Positive | 5282623 - 5282698 | Not Available |
| hypothetical protein | C5P43_30380 | Not Available | Negative | 5282799 - 5282986 | 7122.88 |
| metal-binding protein zint | C5P43_30385 | Not Available | Negative | 5282987 - 5283344 | 13305.7 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | C5P43_30390 | Not Available | Negative | 5283601 - 5284215 | 23272.6 |
| fad-dependent oxidoreductase | C5P43_30395 | Not Available | Positive | 5284224 - 5284764 | 19328.9 |
| ferredoxin-like protein fixx | C5P43_30400 | Not Available | Positive | 5284761 - 5285048 | 10507.5 |
| mfs transporter | C5P43_30405 | Not Available | Positive | 5285106 - 5285460 | 12783.1 |
| metal-binding protein zint | C5P43_30410 | Not Available | Negative | 5285461 - 5285818 | 13306.8 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | C5P43_30415 | Not Available | Negative | 5286075 - 5286689 | 23272.6 |
| arac family transcriptional regulator | C5P43_30420 | Not Available | Negative | 5286698 - 5287023 | 12260.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





