Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colanic acid biosynthesis glycosyltransferase wcac | C5P43_30315 | Not Available | Positive | 5275540 - 5276471 | 34589.6 |
| putative colanic acid polymerase wcad | C5P43_30320 | Not Available | Positive | 5276446 - 5276782 | 12595.2 |
| colanic acid biosynthesis glycosyltransferase wcac | C5P43_30325 | Not Available | Positive | 5276783 - 5277714 | 34588.6 |
| putative colanic acid polymerase wcad | C5P43_30330 | Not Available | Positive | 5277689 - 5278025 | 12581.1 |
| acyl-coa thioesterase | C5P43_30335 | Not Available | Negative | 5278063 - 5278485 | 14851.6 |
| 3-hydroxybutyryl-coa dehydrogenase | C5P43_30340 | Not Available | Negative | 5278475 - 5279267 | 29020.0 |
| cytochrome bd-ii oxidase subunit cbdx | C5P43_30345 | Not Available | Negative | 5279268 - 5279334 | 2601.46 |
| cytochrome bd-ii ubiquinol oxidase subunit 2 | C5P43_30350 | Not Available | Negative | 5279347 - 5280483 | 42426.3 |
| hypothetical protein | C5P43_30355 | Not Available | Negative | 5280509 - 5281748 | 46255.1 |
| yebc/pmpr family dna-binding transcriptional regulator | C5P43_30360 | Not Available | Positive | 5281749 - 5282169 | 15174.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





