Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_30260 | Not Available | Negative | 5269674 - 5269913 | 9172.43 |
| hypothetical protein | C5P43_30265 | Not Available | Negative | 5269888 - 5270115 | 8758.87 |
| porin ompc | C5P43_30270 | Not Available | Positive | 5270396 - 5270538 | 5036.11 |
| fatty acid oxidation complex subunit alpha fadb | C5P43_30275 | Not Available | Positive | 5270582 - 5271792 | 43120.6 |
| ethanolamine utilization protein eutj | C5P43_30280 | Not Available | Negative | 5271793 - 5272265 | 16804.9 |
| aldehyde dehydrogenase eute | C5P43_30285 | Not Available | Negative | 5272276 - 5273046 | 27206.1 |
| hypothetical protein | C5P43_30290 | Not Available | Negative | 5273049 - 5273963 | 34751.9 |
| altronate oxidoreductase | C5P43_30300 | Not Available | Negative | 5274170 - 5274295 | 4631.51 |
| hypothetical protein | C5P43_30305 | Not Available | Positive | 5274296 - 5274495 | 6702.14 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | C5P43_30310 | Not Available | Negative | 5274530 - 5275539 | 36281.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





