Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | C5P43_30210 | Not Available | Negative | 5263219 - 5264228 | 36254.7 |
| molybdenum abc transporter atp-binding protein modc | C5P43_30215 | Not Available | Negative | 5264229 - 5264991 | 28076.6 |
| molybdate abc transporter permease | C5P43_30220 | Not Available | Negative | 5264994 - 5265493 | 17905.3 |
| molybdenum abc transporter atp-binding protein modc | C5P43_30225 | Not Available | Negative | 5265494 - 5266256 | 28076.6 |
| molybdate abc transporter permease | C5P43_30230 | Not Available | Negative | 5266259 - 5266758 | 17905.3 |
| trehalose-phosphatase | C5P43_30235 | Not Available | Negative | 5266759 - 5267275 | 18950.9 |
| l-arabinose abc transporter permease arah | C5P43_30240 | Not Available | Negative | 5267442 - 5268019 | 20205.4 |
| trehalose-phosphatase | C5P43_30245 | Not Available | Negative | 5268020 - 5268536 | 18907.9 |
| l-arabinose abc transporter permease arah | C5P43_30250 | Not Available | Negative | 5268703 - 5269280 | 20219.4 |
| phosphotransferase rcsd | C5P43_30255 | Not Available | Negative | 5269281 - 5269657 | 14401.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





