Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xaa-pro dipeptidase | C5P43_30160 | Not Available | Negative | 5256589 - 5257591 | 37877.0 |
| hypothetical protein | C5P43_30165 | Not Available | Positive | 5257655 - 5257864 | 8186.9 |
| fe3+-hydroxamate abc transporter permease fhub | C5P43_30170 | Not Available | Negative | 5257865 - 5259139 | 44674.9 |
| fe3+-hydroxamate abc transporter permease fhub | C5P43_30175 | Not Available | Negative | 5259140 - 5260414 | 44604.7 |
| thiamine phosphate synthase | C5P43_30180 | Not Available | Positive | 5260506 - 5260922 | 15670.8 |
| hypothetical protein | C5P43_30185 | Not Available | Positive | 5260926 - 5261282 | 13520.2 |
| excinuclease abc subunit a | C5P43_30190 | Not Available | Negative | 5261317 - 5261688 | 13264.9 |
| type iv pili twitching motility protein pilt | C5P43_30195 | Not Available | Negative | 5261773 - 5262753 | 35944.3 |
| yggs family pyridoxal phosphate enzyme | C5P43_30200 | Not Available | Positive | 5262771 - 5262958 | 6712.9 |
| copper oxidase | C5P43_30205 | Not Available | Positive | 5262959 - 5263172 | 7835.35 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





