Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_30110 | Not Available | Positive | 5251270 - 5251471 | 7644.13 |
| duf1315 domain-containing protein | C5P43_30115 | Not Available | Positive | 5251472 - 5251600 | 4790.82 |
| bifunctional nicotinamidase/pyrazinamidase | C5P43_30120 | Not Available | Negative | 5251761 - 5252402 | 23416.4 |
| hypothetical protein | C5P43_30125 | Not Available | Negative | 5252413 - 5252753 | 12103.6 |
| mfs transporter | C5P43_30130 | Not Available | Positive | 5252754 - 5253835 | 38725.6 |
| mfs transporter | C5P43_30135 | Not Available | Negative | 5253914 - 5254035 | 4071.1 |
| phosphatidylserine decarboxylase | C5P43_30140 | Not Available | Negative | 5254036 - 5254925 | 33237.4 |
| ribosome small subunit-dependent gtpase a | C5P43_30145 | Not Available | Negative | 5255022 - 5255312 | 11157.9 |
| xaa-pro dipeptidase | C5P43_30150 | Not Available | Negative | 5255313 - 5256315 | 37877.0 |
| hypothetical protein | C5P43_30155 | Not Available | Positive | 5256379 - 5256588 | 8236.91 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





