Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide abc transporter atp-binding protein | C5P43_30000 | Not Available | Negative | 5234695 - 5234938 | 8800.76 |
| dipeptide abc transporter atp-binding protein | C5P43_30005 | Not Available | Negative | 5234935 - 5235918 | 35816.6 |
| peptide abc transporter permease | C5P43_30010 | Not Available | Negative | 5235929 - 5235992 | 2215.73 |
| phosphonate abc transporter permease | C5P43_30015 | Not Available | Negative | 5235993 - 5236368 | 13984.3 |
| phosphonate abc transporter substrate-binding protein | C5P43_30020 | Not Available | Negative | 5236474 - 5237288 | 29800.3 |
| n-acetylmuramoyl-l-alanine amidase | C5P43_30025 | Not Available | Positive | 5237363 - 5238584 | 44667.9 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | C5P43_30030 | Not Available | Negative | 5238585 - 5239821 | 45417.1 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | C5P43_30035 | Not Available | Negative | 5239878 - 5241114 | 45535.3 |
| abc transporter atp-binding protein | C5P43_30040 | Not Available | Negative | 5241171 - 5242167 | 38172.5 |
| 23s rrna (guanine(2445)-n(2))/(guanine(2069)-n(7))- methyltransferase | C5P43_30045 | Not Available | Negative | 5242179 - 5242459 | 10564.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





