Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system hok family toxin | C5P43_29945 | Not Available | Negative | 5229605 - 5229757 | 5603.15 |
| phosphoadenosine phosphosulfate reductase | C5P43_29955 | Not Available | Negative | 5230022 - 5230756 | 27974.3 |
| terminase small subunit | C5P43_29960 | Not Available | Positive | 5230979 - 5231524 | 20442.2 |
| terminase | C5P43_29965 | Not Available | Positive | 5231499 - 5232085 | 22564.8 |
| crossover junction endodeoxyribonuclease ruvc | C5P43_29970 | Not Available | Negative | 5232086 - 5232300 | 7951.8 |
| yebc/pmpr family dna-binding transcriptional regulator | C5P43_29975 | Not Available | Negative | 5232335 - 5233075 | 26438.1 |
| dihydroneopterin triphosphate diphosphatase | C5P43_29980 | Not Available | Negative | 5233104 - 5233396 | 11126.2 |
| dipeptide abc transporter atp-binding protein | C5P43_29985 | Not Available | Negative | 5233397 - 5233640 | 8826.85 |
| dipeptide transport atp-binding protein dppd | C5P43_29990 | Not Available | Negative | 5233637 - 5234620 | 35846.5 |
| peptide abc transporter permease | C5P43_29995 | Not Available | Negative | 5234631 - 5234694 | 2215.73 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





