Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructuronate reductase | C5P43_29790 | Not Available | Positive | 5200479 - 5201380 | 33135.8 |
| transporter | C5P43_29795 | Not Available | Positive | 5201381 - 5202174 | 28888.8 |
| deoxyribodipyrimidine photolyase | C5P43_29800 | Not Available | Negative | 5202216 - 5202743 | 20257.0 |
| excinuclease abc subunit a | C5P43_29805 | Not Available | Positive | 5202744 - 5204105 | 49507.8 |
| excinuclease abc subunit a | C5P43_29810 | Not Available | Positive | 5204106 - 5205467 | 49507.8 |
| hypothetical protein | C5P43_29815 | Not Available | Positive | 5205676 - 5206821 | 42920.1 |
| hypothetical protein | C5P43_29825 | Not Available | Negative | 5208344 - 5208409 | 2699.43 |
| hypothetical protein | C5P43_29830 | Not Available | Positive | 5208480 - 5209082 | 22676.2 |
| crossover junction endodeoxyribonuclease ruvc | C5P43_29835 | Not Available | Negative | 5209084 - 5209517 | 15575.0 |
| is4-like element is421 family transposase | C5P43_29840 | Not Available | Positive | 5209575 - 5210687 | 40911.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





