Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chew | C5P43_29690 | Not Available | Positive | 5186031 - 5186218 | 6935.32 |
| nadph-dependent assimilatory sulfite reductase hemoprotein subunit | C5P43_29695 | Not Available | Positive | 5186219 - 5187613 | 52204.6 |
| nadph-dependent assimilatory sulfite reductase hemoprotein subunit | C5P43_29700 | Not Available | Positive | 5187614 - 5189008 | 52204.6 |
| phage tail tape measure protein | C5P43_29705 | Not Available | Positive | 5189009 - 5190400 | 48411.4 |
| imidazole glycerol phosphate synthase subunit hisf | C5P43_29710 | Not Available | Positive | 5190401 - 5190987 | 21327.4 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase | C5P43_29715 | Not Available | Positive | 5190981 - 5191592 | 22856.2 |
| abc transporter permease | C5P43_29720 | Not Available | Negative | 5191791 - 5192319 | 19410.6 |
| abc transporter substrate-binding protein | C5P43_29725 | Not Available | Negative | 5192292 - 5193166 | 31872.8 |
| abc transporter permease | C5P43_29730 | Not Available | Negative | 5193167 - 5193695 | 19350.5 |
| abc transporter substrate-binding protein | C5P43_29735 | Not Available | Negative | 5193668 - 5194542 | 31993.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





