Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase expression/formation protein hype | C5P43_29540 | Not Available | Negative | 5166301 - 5166444 | 5068.29 |
| hemolysin iii family protein | C5P43_29545 | Not Available | Negative | 5166585 - 5167244 | 23848.2 |
| asch domain-containing protein | C5P43_29550 | Not Available | Negative | 5167408 - 5167719 | 11891.0 |
| hypothetical protein | C5P43_29555 | Not Available | Positive | 5167758 - 5167871 | 4009.92 |
| abc transporter atp-binding protein | C5P43_29560 | Not Available | Negative | 5167872 - 5168442 | 20299.0 |
| secretion protein hlyd | C5P43_29565 | Not Available | Negative | 5168435 - 5169291 | 31169.4 |
| abc transporter atp-binding protein | C5P43_29570 | Not Available | Negative | 5169292 - 5169862 | 20299.0 |
| secretion protein hlyd | C5P43_29575 | Not Available | Negative | 5169855 - 5170711 | 31168.4 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | C5P43_29580 | Not Available | Positive | 5170712 - 5171193 | 17390.6 |
| homoserine kinase | C5P43_29585 | Not Available | Positive | 5171195 - 5172127 | 33611.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





