Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter atp-binding protein sapd | C5P43_29490 | Not Available | Positive | 5159284 - 5159675 | 14471.7 |
| peptide abc transporter atp-binding protein sapf | C5P43_29495 | Not Available | Positive | 5159677 - 5160483 | 30572.5 |
| hypothetical protein | C5P43_29500 | Not Available | Positive | 5160551 - 5160717 | 6839.34 |
| hypothetical protein | C5P43_29505 | Not Available | Negative | 5160718 - 5161757 | 37939.3 |
| protein phosphatase 2c domain-containing protein | C5P43_29510 | Not Available | Negative | 5161754 - 5162149 | 14401.2 |
| capsid protein | C5P43_29515 | Not Available | Negative | 5162150 - 5162651 | 18702.3 |
| capsid protein | C5P43_29520 | Not Available | Negative | 5162668 - 5163501 | 30625.8 |
| capsid protein | C5P43_29525 | Not Available | Negative | 5163582 - 5164083 | 18702.3 |
| capsid protein | C5P43_29530 | Not Available | Negative | 5164100 - 5164933 | 30659.8 |
| formate hydrogenlyase transcriptional activator flha | C5P43_29535 | Not Available | Negative | 5165014 - 5166227 | 46386.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





