Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 5153421 - 5153496 | Not Available |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | C5P43_29445 | Not Available | Positive | 5153533 - 5154002 | 17016.2 |
| ribonucleoside hydrolase rihc | C5P43_29450 | Not Available | Positive | 5154068 - 5154971 | 32292.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | C5P43_29455 | Not Available | Positive | 5154972 - 5155441 | 17081.4 |
| ribonucleoside hydrolase rihc | C5P43_29460 | Not Available | Positive | 5155507 - 5156410 | 32290.4 |
| phage tail protein | C5P43_29465 | Not Available | Positive | 5156411 - 5156582 | 6438.71 |
| phage minor tail protein l | C5P43_29470 | Not Available | Positive | 5156592 - 5157290 | 25652.0 |
| phage tail protein | C5P43_29475 | Not Available | Positive | 5157296 - 5157847 | 20939.7 |
| primosomal protein n' | C5P43_29480 | Not Available | Negative | 5157848 - 5158583 | 27081.5 |
| 50s ribosomal protein l31 | C5P43_29485 | Not Available | Positive | 5158786 - 5158998 | 7871.49 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





