Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | C5P43_29390 | Not Available | Positive | 5146284 - 5147237 | 34943.2 |
| iron-sulfur cluster repair protein ytfe | C5P43_29395 | Not Available | Positive | 5147345 - 5147742 | 15148.4 |
| eama/rhat family transporter | C5P43_29400 | Not Available | Positive | 5147745 - 5148698 | 34923.2 |
| iron-sulfur cluster repair protein ytfe | C5P43_29405 | Not Available | Positive | 5148806 - 5149203 | 15148.4 |
| fe(3+)-hydroxamate abc transporter substrate-binding protein fhud | C5P43_29410 | Not Available | Negative | 5149204 - 5150071 | 32378.4 |
| iron-hydroxamate transporter atp-binding subunit | C5P43_29415 | Not Available | Negative | 5150071 - 5150647 | 20784.4 |
| fe(3+)-hydroxamate abc transporter substrate-binding protein fhud | C5P43_29420 | Not Available | Negative | 5150648 - 5151515 | 32455.5 |
| iron-hydroxamate transporter atp-binding subunit | C5P43_29425 | Not Available | Negative | 5151515 - 5152091 | 20853.5 |
| gtpase rsga | C5P43_29430 | Not Available | Negative | 5152092 - 5152570 | 17795.4 |
| oligoribonuclease | C5P43_29435 | Not Available | Positive | 5152665 - 5153210 | 20816.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





