Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_29335 | Not Available | Positive | 5139514 - 5140410 | 33394.6 |
| utp--glucose-1-phosphate uridylyltransferase | C5P43_29340 | Not Available | Negative | 5140411 - 5140481 | 2365.12 |
| n-acetyl-alpha-d-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase | C5P43_29345 | Not Available | Negative | 5140724 - 5141719 | 37144.3 |
| mce family protein | C5P43_29350 | Not Available | Negative | 5141883 - 5142202 | 11975.4 |
| paraquat-inducible protein a | C5P43_29355 | Not Available | Negative | 5142171 - 5143349 | 44349.6 |
| large conductance mechanosensitive channel protein mscl | C5P43_29360 | Not Available | Positive | 5143353 - 5143561 | 7755.6 |
| ribosome alternative rescue factor arfa | C5P43_29365 | Not Available | Negative | 5143558 - 5143776 | 8199.92 |
| heavy metal-responsive transcriptional regulator | C5P43_29370 | Not Available | Negative | 5143832 - 5144257 | 16180.4 |
| duf1992 domain-containing protein | C5P43_29375 | Not Available | Negative | 5144268 - 5144636 | 13915.5 |
| 50s ribosomal protein l17 | C5P43_29380 | Not Available | Negative | 5144743 - 5144818 | 2521.85 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





