Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage portal protein | C5P43_29285 | Not Available | Negative | 5133027 - 5133874 | 31517.2 |
| lambda prophage-derived head-to-tail joining protein w | C5P43_29290 | Not Available | Negative | 5133871 - 5134077 | 7613.19 |
| phage terminase large subunit family protein | C5P43_29295 | Not Available | Negative | 5134074 - 5134505 | 16112.9 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | C5P43_29300 | Not Available | Positive | 5134753 - 5135984 | 45513.5 |
| phosphonate c-p lyase system protein phnk | C5P43_29305 | Not Available | Negative | 5135985 - 5136451 | 17183.4 |
| carbon-phosphorus lyase complex subunit phnj | C5P43_29310 | Not Available | Negative | 5136448 - 5137293 | 31833.9 |
| carbon-phosphorus lyase complex subunit phni | C5P43_29315 | Not Available | Negative | 5137286 - 5137462 | 6525.51 |
| hypothetical protein | C5P43_29320 | Not Available | Positive | 5137463 - 5138043 | 20779.0 |
| hypothetical protein | C5P43_29325 | Not Available | Positive | 5138040 - 5138936 | 33331.6 |
| hypothetical protein | C5P43_29330 | Not Available | Positive | 5138937 - 5139517 | 20806.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





