Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1877 domain-containing protein | C5P43_29230 | Not Available | Negative | 5126875 - 5127092 | 8288.15 |
| crispr-associated endonuclease cas3'' | C5P43_29235 | Not Available | Negative | 5127093 - 5127217 | 5075.06 |
| hok/gef family protein | C5P43_29240 | Not Available | Negative | 5127411 - 5127563 | 5559.11 |
| phosphoadenosine phosphosulfate reductase | C5P43_29250 | Not Available | Negative | 5127828 - 5128562 | 27991.4 |
| polynucleotide modification protein | C5P43_29255 | Not Available | Positive | 5128580 - 5129502 | 35434.8 |
| sel1 repeat family protein | C5P43_29260 | Not Available | Negative | 5129512 - 5130051 | 20271.1 |
| polynucleotide modification protein | C5P43_29265 | Not Available | Positive | 5130063 - 5130985 | 35396.8 |
| sel1 repeat family protein | C5P43_29270 | Not Available | Negative | 5130995 - 5131534 | 20251.1 |
| crotonobetainyl-coa dehydrogenase | C5P43_29275 | Not Available | Negative | 5131546 - 5132663 | 41701.7 |
| l-carnitine/gamma-butyrobetaine antiporter | C5P43_29280 | Not Available | Negative | 5132694 - 5133026 | 11961.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





