Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline/glycine betaine transporter prop | C5P43_29180 | Not Available | Positive | 5118593 - 5119647 | 38663.2 |
| colanic acid biosynthesis glycosyltransferase wcae | C5P43_29185 | Not Available | Negative | 5119648 - 5120120 | 17453.9 |
| putative colanic acid polymerase wcad | C5P43_29190 | Not Available | Negative | 5120131 - 5121138 | 37688.1 |
| acetyl-coa c-acyltransferase | C5P43_29195 | Not Available | Positive | 5121139 - 5121623 | 16702.3 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | C5P43_29200 | Not Available | Positive | 5121910 - 5122627 | 26670.9 |
| acetyl-coa c-acyltransferase | C5P43_29205 | Not Available | Positive | 5122628 - 5123112 | 16702.3 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | C5P43_29210 | Not Available | Positive | 5123399 - 5124116 | 26715.9 |
| nadh-quinone oxidoreductase subunit nuon | C5P43_29215 | Not Available | Positive | 5124117 - 5125320 | 42943.6 |
| duf1877 domain-containing protein | C5P43_29220 | Not Available | Negative | 5125387 - 5125604 | 8288.15 |
| nadh-quinone oxidoreductase subunit nuon | C5P43_29225 | Not Available | Positive | 5125605 - 5126808 | 42943.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





