Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional activator ttdr | C5P43_01130 | Not Available | Negative | 204794 - 205726 | 35316.6 |
| l+-tartrate dehydratase subunit alpha | C5P43_01140 | Not Available | Positive | 205933 - 206844 | 32735.5 |
| l(+)-tartrate dehydratase subunit beta | C5P43_01145 | Not Available | Positive | 206841 - 207446 | 22680.8 |
| anion permease | C5P43_01150 | Not Available | Positive | 207494 - 208957 | 52971.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | C5P43_01155 | Not Available | Negative | 209000 - 210013 | 36009.5 |
| 30s ribosomal protein s21 | C5P43_01160 | Not Available | Positive | 210250 - 210465 | 8500.42 |
| dna primase | C5P43_01165 | Not Available | Positive | 210576 - 212321 | 65568.5 |
| rna polymerase subunit sigma | C5P43_01170 | Not Available | Positive | 212335 - 212457 | 4564.46 |
| rna polymerase sigma factor rpod | C5P43_01175 | Not Available | Positive | 212516 - 214357 | 70211.2 |
| mismatch-specific dna-glycosylase | C5P43_01180 | Not Available | Negative | 214436 - 214942 | 18674.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





