Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug abc transporter atp-binding protein | C5P43_28970 | Not Available | Negative | 5087713 - 5089263 | 57202.9 |
| multidrug abc transporter atp-binding protein | C5P43_28975 | Not Available | Negative | 5089264 - 5090814 | 57160.9 |
| toxin-antitoxin system hicb family antitoxin | C5P43_28980 | Not Available | Negative | 5090815 - 5090892 | 2765.32 |
| type ii toxin-antitoxin system hica family toxin | C5P43_28985 | Not Available | Negative | 5090885 - 5091163 | 10187.3 |
| flagellar biosynthesis protein flha | C5P43_28990 | Not Available | Negative | 5091268 - 5092364 | 40258.9 |
| toxin-antitoxin system hicb family antitoxin | C5P43_28995 | Not Available | Negative | 5092365 - 5092442 | 2765.32 |
| type ii toxin-antitoxin system hica family toxin | C5P43_29000 | Not Available | Negative | 5092435 - 5092713 | 10201.3 |
| flagellar biosynthesis protein flha | C5P43_29005 | Not Available | Negative | 5092818 - 5093914 | 40297.1 |
| peroxide stress protein yaaa | C5P43_29010 | Not Available | Negative | 5093915 - 5094522 | 23077.8 |
| sodium:alanine symporter family protein | C5P43_29015 | Not Available | Negative | 5094592 - 5095457 | 31161.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





