Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1471 domain-containing protein | C5P43_28920 | Not Available | Positive | 5083042 - 5083104 | 2232.66 |
| duf1440 domain-containing protein | C5P43_28925 | Not Available | Negative | 5083179 - 5083730 | 20750.6 |
| l-ribulose-5-phosphate 4-epimerase ulaf | C5P43_28930 | Not Available | Negative | 5083827 - 5084513 | 25339.2 |
| ribulose phosphate epimerase | C5P43_28935 | Not Available | Negative | 5084513 - 5084599 | 2943.52 |
| hypothetical protein | C5P43_28940 | Not Available | Positive | 5084669 - 5085334 | 25403.0 |
| universal stress protein | C5P43_28945 | Not Available | Positive | 5085309 - 5085506 | 7432.07 |
| hypothetical protein | C5P43_28950 | Not Available | Positive | 5085413 - 5085625 | 7868.41 |
| lactate utilization protein c | C5P43_28955 | Not Available | Negative | 5085580 - 5086104 | 18578.5 |
| glucokinase | C5P43_28960 | Not Available | Negative | 5086237 - 5087202 | 34751.1 |
| ion channel protein | C5P43_28965 | Not Available | Positive | 5087406 - 5087712 | 10557.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





