Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | C5P43_28870 | Not Available | Negative | 5076558 - 5076766 | 7746.19 |
| phosphate acyltransferase | C5P43_28875 | Not Available | Negative | 5076767 - 5076983 | 7547.18 |
| 50s ribosomal protein l32 | C5P43_28880 | Not Available | Negative | 5077064 - 5077237 | 6446.77 |
| 23s rrna accumulation protein yced | C5P43_28885 | Not Available | Negative | 5077289 - 5077810 | 19315.9 |
| septum formation protein maf | C5P43_28890 | Not Available | Positive | 5078009 - 5078355 | 12817.4 |
| nadh-quinone oxidoreductase subunit h | C5P43_28895 | Not Available | Negative | 5078356 - 5078633 | 10556.3 |
| nadh-quinone oxidoreductase subunit g | C5P43_28900 | Not Available | Negative | 5078630 - 5079922 | 46688.5 |
| tmao reductase system sensor histidine kinase/response regulator tors | C5P43_28905 | Not Available | Positive | 5079923 - 5081482 | 56915.2 |
| propionate catabolism operon regulatory protein prpr | C5P43_28910 | Not Available | Negative | 5081483 - 5082321 | 30893.2 |
| methylisocitrate lyase | C5P43_28915 | Not Available | Positive | 5082560 - 5083041 | 16894.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





