Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_28820 | Not Available | Negative | 5069330 - 5069644 | 11819.2 |
| glutamate/gamma-aminobutyrate family transporter yjem | C5P43_28825 | Not Available | Negative | 5069696 - 5070399 | 25605.9 |
| flagellin flic | C5P43_28830 | Not Available | Negative | 5070740 - 5071992 | 43845.6 |
| flagellum-specific atp synthase flii | C5P43_28835 | Not Available | Positive | 5072051 - 5073424 | 49318.6 |
| flagellar biosynthesis chaperone flij | C5P43_28840 | Not Available | Positive | 5073443 - 5073584 | 5318.38 |
| flagellum-specific atp synthase | C5P43_28845 | Not Available | Positive | 5073643 - 5075016 | 49362.7 |
| flagellar biosynthesis chaperone flij | C5P43_28850 | Not Available | Positive | 5075035 - 5075176 | 5318.38 |
| 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase | C5P43_28855 | Not Available | Negative | 5075177 - 5075304 | 4535.51 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | C5P43_28860 | Not Available | Negative | 5075297 - 5076100 | 29716.5 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | C5P43_28865 | Not Available | Negative | 5076168 - 5076548 | 14361.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





